Counterfactuals

Integrating multi-covariate disentanglement with counterfactual analysis on synthetic data enables cell type discovery and counterfactual predictions
CellDISECT models how cell states change across covariates and perturbations, making it easier to ask counterfactual questions in single-cell biology.
Stathis Megas, Arian Amani, Antony Rose, Olli Dufva, Kian Shamsaie, Hesam Asadollahzadeh, Krzysztof Polanski, Muzlifah Haniffa, Sarah Amalia Teichmann, Mohammad Lotfollahi
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Integrating multi-covariate disentanglement with counterfactual analysis on synthetic data enables cell type discovery and counterfactual predictions